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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: SMARCA5 OTTHUMG00000161474

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5

Synonyms

hSNF2H, ISWI, hISWI

Location

Chromosome 4: 143,513,463-143,557,486 forward strand.

VEGA68:CM000666.2

About this gene

This gene has 5 transcripts (splice variants), 13 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMARCA5-001	OTTHUMT00000365077.3	7923	1052aa	OTTHUMP00000220293	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3761	O60264
SMARCA5-002	OTTHUMT00000365158.1	3557	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SMARCA5-003	OTTHUMT00000365159.1	3483	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SMARCA5-004	OTTHUMT00000365160.1	529	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SMARCA5-006	OTTHUMT00000365162.1	363	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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