Description
syntabulin (syntaxin-interacting)
Synonyms
OCSYN, KIAA1472, FLJ20366, SNPHL, GOLSYN
Location
Chromosome 8: 109,573,978-109,691,789 reverse strand.
VEGA68:CM000670.2
About this gene
This gene has 34 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
SYBU-010 | OTTHUMT00000385492.1 | 3435 | 660aa | OTTHUMP00000230552 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43764 | - | |
SYBU-001 | OTTHUMT00000385489.1 | 3244 | 662aa | OTTHUMP00000230549 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43763 | - | |
SYBU-007 | OTTHUMT00000385497.1 | 2995 | 662aa | OTTHUMP00000230557 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43763 | - | |
SYBU-005 | OTTHUMT00000385493.1 | 2919 | 662aa | OTTHUMP00000230553 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43763 | - | |
SYBU-009 | OTTHUMT00000385496.1 | 2870 | 663aa | OTTHUMP00000230556 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47912 | Q9NX95 | |
SYBU-008 | OTTHUMT00000385498.1 | 2645 | 544aa | OTTHUMP00000230558 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55271 | - | |
SYBU-006 | OTTHUMT00000385494.1 | 2636 | 544aa | OTTHUMP00000230554 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55271 | - | |
SYBU-004 | OTTHUMT00000385501.1 | 2498 | 663aa | OTTHUMP00000230560 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47912 | Q9NX95 | |
SYBU-011 | OTTHUMT00000385500.1 | 1983 | 533aa | OTTHUMP00000230559 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS83315 | B7Z4D2 | |
SYBU-002 | OTTHUMT00000385490.1 | 3007 | 668aa | OTTHUMP00000230550 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0C4DG86 | |
SYBU-003 | OTTHUMT00000385491.1 | 2765 | 595aa | OTTHUMP00000230551 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
SYBU-012 | OTTHUMT00000385495.1 | 2717 | 457aa | OTTHUMP00000230555 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B3KRD1 | |
SYBU-014 | OTTHUMT00000385508.2 | 1126 | 204aa | OTTHUMP00000230564 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PNN9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-019 | OTTHUMT00000385517.2 | 748 | 137aa | OTTHUMP00000230571 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PLB9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-020 | OTTHUMT00000385515.2 | 613 | 151aa | OTTHUMP00000230570 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PN31 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-025 | OTTHUMT00000385503.2 | 594 | 144aa | OTTHUMP00000230561 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PL50 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-018 | OTTHUMT00000385520.1 | 582 | 76aa | OTTHUMP00000230574 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJ11 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-031 | OTTHUMT00000385518.2 | 582 | 103aa | OTTHUMP00000230572 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PRH8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-033 | OTTHUMT00000385512.2 | 575 | 162aa | OTTHUMP00000230567 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PL66 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-028 | OTTHUMT00000385510.1 | 573 | 80aa | OTTHUMP00000230566 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PPS4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-016 | OTTHUMT00000385519.2 | 565 | 95aa | OTTHUMP00000230573 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PI48 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-017 | OTTHUMT00000385505.1 | 564 | 125aa | OTTHUMP00000230563 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PQG2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-015 | OTTHUMT00000385522.2 | 559 | 73aa | OTTHUMP00000230576 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PPC2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-032 | OTTHUMT00000385521.1 | 559 | 76aa | OTTHUMP00000230575 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJ11 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-022 | OTTHUMT00000385509.2 | 558 | 80aa | OTTHUMP00000230565 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PPS4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-021 | OTTHUMT00000385513.2 | 545 | 35aa | OTTHUMP00000230568 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PK96 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-029 | OTTHUMT00000385514.2 | 516 | 34aa | OTTHUMP00000230569 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PRT7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SYBU-013 | OTTHUMT00000385499.1 | 1892 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SYBU-024 | OTTHUMT00000385504.1 | 562 | 47aa | OTTHUMP00000230562 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
SYBU-027 | OTTHUMT00000385502.1 | 573 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SYBU-030 | OTTHUMT00000385506.1 | 556 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SYBU-034 | OTTHUMT00000385516.1 | 578 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SYBU-026 | OTTHUMT00000385507.1 | 561 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SYBU-023 | OTTHUMT00000385511.1 | 530 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |