Description
vacuolar protein sorting 11 homolog (S. cerevisiae)
Synonyms
PEP5, RNF108
Location
Chromosome 11: 119,067,692-119,081,978 forward strand.
VEGA68:CM000673.2
About this gene
This gene has 9 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| VPS11-002 | OTTHUMT00000389380.4 | 3388 | 931aa | OTTHUMP00000276862 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS76485 | B7Z879 | |
| VPS11-001 | OTTHUMT00000389382.6 | 3313 | 941aa | OTTHUMP00000276861 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73404 | A0A087WXL6 | |
| VPS11-005 | OTTHUMT00000389680.2 | 542 | 181aa | OTTHUMP00000276863 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087X2J4 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| VPS11-003 | OTTHUMT00000389676.5 | 1320 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| VPS11-009 | OTTHUMT00000389682.1 | 626 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| VPS11-008 | OTTHUMT00000389681.1 | 585 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| VPS11-004 | OTTHUMT00000389677.3 | 3352 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| VPS11-007 | OTTHUMT00000389679.1 | 1952 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| VPS11-006 | OTTHUMT00000389678.1 | 576 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
