Description
cancer susceptibility candidate 5
Location
Chromosome 15: 40,594,020-40,664,342 forward strand.
VEGA68:CM000677.2
About this gene
This gene has 12 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CASC5-002 | OTTHUMT00000390224.2 | 9573 | 2342aa | OTTHUMP00000233260 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42023 | Q8NG31 | |
| CASC5-001 | OTTHUMT00000390226.1 | 7607 | 2316aa | OTTHUMP00000233262 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42024 | - | |
| CASC5-008 | OTTHUMT00000390415.2 | 579 | 193aa | OTTHUMP00000233429 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| CASC5-005 | OTTHUMT00000390411.3 | 578 | 7aa | OTTHUMP00000248620 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CASC5-006 | OTTHUMT00000390412.3 | 259 | 10aa | OTTHUMP00000248621 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CASC5-013 | OTTHUMT00000390414.1 | 5584 | 1361aa | OTTHUMP00000233428 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CASC5-007 | OTTHUMT00000390413.2 | 565 | 80aa | OTTHUMP00000248622 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CASC5-003 | OTTHUMT00000390225.2 | 3211 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CASC5-012 | OTTHUMT00000390418.2 | 669 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CASC5-004 | OTTHUMT00000390227.1 | 5923 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CASC5-010 | OTTHUMT00000390417.1 | 564 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CASC5-009 | OTTHUMT00000390416.1 | 254 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
