Description
coronin, actin binding protein, 1C
Synonyms
HCRNN4, coronin-3
Location
Chromosome 12: 108,645,109-108,731,596 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 21 transcripts (splice variants), 8 orthologues and 7 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CORO1C-001 | OTTHUMT00000403802.1 | 3892 | 474aa | OTTHUMP00000240966 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9120 | Q9ULV4 | |
| CORO1C-007 | OTTHUMT00000403803.1 | 2487 | 474aa | OTTHUMP00000240967 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9120 | Q9ULV4 | |
| CORO1C-008 | OTTHUMT00000403810.3 | 1710 | 480aa | OTTHUMP00000240970 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| CORO1C-009 | OTTHUMT00000403808.1 | 1296 | 369aa | OTTHUMP00000240968 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B4E3S0 | |
| CORO1C-014 | OTTHUMT00000403893.2 | 899 | 162aa | OTTHUMP00000241008 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VSA4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CORO1C-011 | OTTHUMT00000403811.2 | 587 | 125aa | OTTHUMP00000240971 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VV53 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CORO1C-020 | OTTHUMT00000403886.1 | 577 | 165aa | OTTHUMP00000241004 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YHL7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CORO1C-013 | OTTHUMT00000403894.2 | 567 | 151aa | OTTHUMP00000241009 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8W1H8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CORO1C-021 | OTTHUMT00000403890.2 | 566 | 181aa | OTTHUMP00000241005 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VVB7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CORO1C-012 | OTTHUMT00000403892.2 | 547 | 163aa | OTTHUMP00000241007 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VRE9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CORO1C-016 | OTTHUMT00000403891.2 | 547 | 169aa | OTTHUMP00000241006 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VTT6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CORO1C-004 | OTTHUMT00000403804.1 | 2106 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CORO1C-006 | OTTHUMT00000403805.1 | 2028 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CORO1C-005 | OTTHUMT00000403807.1 | 1511 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CORO1C-002 | OTTHUMT00000403809.1 | 1245 | 159aa | OTTHUMP00000240969 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8VUX3 | |
| CORO1C-003 | OTTHUMT00000403806.1 | 891 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CORO1C-017 | OTTHUMT00000403888.1 | 547 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CORO1C-019 | OTTHUMT00000403887.1 | 873 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CORO1C-015 | OTTHUMT00000403895.1 | 804 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CORO1C-018 | OTTHUMT00000403889.1 | 683 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CORO1C-010 | OTTHUMT00000403812.1 | 474 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
