Description
LETM1 domain containing 1
Synonyms
HCCR, HCCR2, HCCR1, HCCR-2, HCCR-1
Location
Chromosome 12: 51,047,962-51,060,424 forward strand.
VEGA68:CM000674.2
About this gene
This gene has 39 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
LETMD1-006 | OTTHUMT00000404716.1 | 2123 | 373aa | OTTHUMP00000241490 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58231 | - | |
LETMD1-001 | OTTHUMT00000404710.1 | 2112 | 360aa | OTTHUMP00000241487 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8806 | Q6P1Q0 | |
LETMD1-008 | OTTHUMT00000404718.1 | 1665 | 236aa | OTTHUMP00000241491 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73469 | F8W1Z2 | |
LETMD1-012 | OTTHUMT00000404722.1 | 1713 | 243aa | OTTHUMP00000241494 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VP71 | |
LETMD1-003 | OTTHUMT00000404709.1 | 1389 | 304aa | OTTHUMP00000241486 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
LETMD1-015 | OTTHUMT00000404704.2 | 1186 | 290aa | OTTHUMP00000241484 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VZA2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
LETMD1-019 | OTTHUMT00000404711.3 | 818 | 260aa | OTTHUMP00000241488 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VVQ3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
LETMD1-038 | OTTHUMT00000404891.1 | 727 | 98aa | OTTHUMP00000241592 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
LETMD1-037 | OTTHUMT00000404889.1 | 705 | 144aa | OTTHUMP00000241591 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YIV5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
LETMD1-036 | OTTHUMT00000404886.1 | 618 | 110aa | OTTHUMP00000241590 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
LETMD1-027 | OTTHUMT00000404882.2 | 601 | 109aa | OTTHUMP00000241587 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VR33 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
LETMD1-025 | OTTHUMT00000404880.2 | 582 | 184aa | OTTHUMP00000241585 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8W0R0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
LETMD1-024 | OTTHUMT00000404879.2 | 568 | 179aa | OTTHUMP00000241584 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
LETMD1-026 | OTTHUMT00000404881.3 | 565 | 158aa | OTTHUMP00000241586 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VS60 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
LETMD1-034 | OTTHUMT00000404877.2 | 469 | 144aa | OTTHUMP00000241582 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
LETMD1-028 | OTTHUMT00000404883.2 | 433 | 135aa | OTTHUMP00000241588 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
LETMD1-007 | OTTHUMT00000404717.1 | 917 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
LETMD1-002 | OTTHUMT00000404705.1 | 2001 | 138aa | OTTHUMP00000241485 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
LETMD1-004 | OTTHUMT00000404715.1 | 1658 | 41aa | OTTHUMP00000241489 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
LETMD1-010 | OTTHUMT00000404721.1 | 1566 | 147aa | OTTHUMP00000241493 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
LETMD1-009 | OTTHUMT00000404720.1 | 1480 | 155aa | OTTHUMP00000241492 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
LETMD1-029 | OTTHUMT00000404884.1 | 563 | 43aa | OTTHUMP00000241589 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
LETMD1-021 | OTTHUMT00000404708.3 | 552 | 43aa | OTTHUMP00000241581 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
LETMD1-022 | OTTHUMT00000404878.1 | 521 | 99aa | OTTHUMP00000241583 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
LETMD1-032 | OTTHUMT00000404885.1 | 850 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
LETMD1-016 | OTTHUMT00000404706.1 | 608 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
LETMD1-033 | OTTHUMT00000404875.1 | 562 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
LETMD1-017 | OTTHUMT00000404707.1 | 555 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
LETMD1-039 | OTTHUMT00000404892.1 | 475 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
LETMD1-023 | OTTHUMT00000404876.1 | 455 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
LETMD1-011 | OTTHUMT00000404719.1 | 2020 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
LETMD1-013 | OTTHUMT00000404723.1 | 1623 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
LETMD1-005 | OTTHUMT00000404714.1 | 907 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
LETMD1-030 | OTTHUMT00000404888.1 | 894 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
LETMD1-035 | OTTHUMT00000404890.1 | 809 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
LETMD1-031 | OTTHUMT00000404887.1 | 727 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
LETMD1-020 | OTTHUMT00000404713.1 | 578 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
LETMD1-018 | OTTHUMT00000404712.1 | 549 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
LETMD1-014 | OTTHUMT00000404724.1 | 2948 | No protein | - | TEC | - | - |