Description
calmodulin 1 (phosphorylase kinase, delta)
Synonyms
PHKD, CAMI, DD132
Location
Chromosome 14: 90,396,502-90,408,261 forward strand.
VEGA68:CM000676.2
About this gene
This gene has 16 transcripts (splice variants), 15 orthologues and 14 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CALM1-001 | OTTHUMT00000411346.1 | 4242 | 149aa | OTTHUMP00000244938 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9892 | P62158 | |
| CALM1-004 | OTTHUMT00000411347.1 | 1104 | 150aa | OTTHUMP00000244939 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ETZ0 | |
| CALM1-006 | OTTHUMT00000411356.1 | 1064 | 113aa | OTTHUMP00000244942 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q96HY3 | |
| CALM1-012 | OTTHUMT00000411354.1 | 877 | 113aa | OTTHUMP00000244941 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q96HY3 | |
| CALM1-007 | OTTHUMT00000411345.2 | 557 | 98aa | OTTHUMP00000244937 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V361 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CALM1-002 | OTTHUMT00000411352.1 | 3701 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CALM1-003 | OTTHUMT00000411353.1 | 1420 | 83aa | OTTHUMP00000244940 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V479 | |
| CALM1-013 | OTTHUMT00000411358.1 | 438 | 76aa | OTTHUMP00000244943 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V226 | |
| CALM1-016 | OTTHUMT00000411348.1 | 554 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CALM1-005 | OTTHUMT00000411355.1 | 2670 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALM1-009 | OTTHUMT00000411350.1 | 588 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALM1-010 | OTTHUMT00000411351.1 | 583 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALM1-008 | OTTHUMT00000411349.1 | 569 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALM1-011 | OTTHUMT00000411357.1 | 554 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALM1-014 | OTTHUMT00000411359.1 | 531 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALM1-015 | OTTHUMT00000411360.1 | 444 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
