Description
TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
Synonyms
MGC:39976, TAFI95, TAFI110, SL1
Location
Chromosome 16: 84,177,852-84,187,063 reverse strand.
VEGA68:CM000678.2
About this gene
This gene has 22 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TAF1C-001 | OTTHUMT00000433045.2 | 3879 | 869aa | OTTHUMP00000254733 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32496 | Q15572 | |
| TAF1C-005 | OTTHUMT00000433042.1 | 3678 | 775aa | OTTHUMP00000254731 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45535 | - | |
| TAF1C-002 | OTTHUMT00000433047.1 | 2972 | 843aa | OTTHUMP00000254735 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58489 | - | |
| TAF1C-003 | OTTHUMT00000433050.1 | 2349 | 537aa | OTTHUMP00000254737 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58488 | - | |
| TAF1C-021 | OTTHUMT00000433114.2 | 1140 | 380aa | OTTHUMP00000254765 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| TAF1C-011 | OTTHUMT00000433056.2 | 602 | 146aa | OTTHUMP00000254741 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF1C-015 | OTTHUMT00000433054.2 | 570 | 93aa | OTTHUMP00000254739 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF1C-014 | OTTHUMT00000433058.2 | 555 | 136aa | OTTHUMP00000254743 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAF1C-010 | OTTHUMT00000433046.1 | 2628 | 209aa | OTTHUMP00000254734 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| TAF1C-007 | OTTHUMT00000433049.1 | 2531 | 58aa | OTTHUMP00000254736 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| TAF1C-017 | OTTHUMT00000433055.1 | 564 | 70aa | OTTHUMP00000254740 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| TAF1C-013 | OTTHUMT00000433057.1 | 555 | 52aa | OTTHUMP00000254742 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| TAF1C-012 | OTTHUMT00000433060.1 | 578 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TAF1C-008 | OTTHUMT00000433043.2 | 4637 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TAF1C-004 | OTTHUMT00000433044.1 | 3810 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TAF1C-006 | OTTHUMT00000433048.1 | 2747 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TAF1C-009 | OTTHUMT00000433051.1 | 1318 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TAF1C-018 | OTTHUMT00000433052.1 | 1044 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TAF1C-016 | OTTHUMT00000433053.1 | 912 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TAF1C-022 | OTTHUMT00000433116.1 | 597 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TAF1C-019 | OTTHUMT00000433059.1 | 290 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TAF1C-020 | OTTHUMT00000433115.1 | 259 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
