Description
calponin 1, basic, smooth muscle
Synonyms
Sm-Calp, SMCC
Location
Chromosome 19: 11,538,717-11,550,323 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 10 transcripts (splice variants), 6 orthologues and 5 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CNN1-002 | OTTHUMT00000458855.1 | 1848 | 247aa | OTTHUMP00000268155 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77238 | B7Z7E1 | |
| CNN1-001 | OTTHUMT00000458854.1 | 1633 | 297aa | OTTHUMP00000268154 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12263 | V9HWA5 | |
| CNN1-003 | OTTHUMT00000458856.1 | 1527 | 247aa | OTTHUMP00000268156 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77238 | B7Z7E1 | |
| CNN1-007 | OTTHUMT00000458863.1 | 700 | 228aa | OTTHUMP00000268162 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ER02 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CNN1-008 | OTTHUMT00000458862.1 | 685 | 173aa | OTTHUMP00000268161 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EQ72 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CNN1-004 | OTTHUMT00000458858.2 | 565 | 116aa | OTTHUMP00000268157 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ENC5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CNN1-005 | OTTHUMT00000458859.2 | 549 | 119aa | OTTHUMP00000268158 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CNN1-010 | OTTHUMT00000458861.2 | 525 | 175aa | OTTHUMP00000268160 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| CNN1-009 | OTTHUMT00000458860.1 | 512 | 115aa | OTTHUMP00000268159 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CNN1-006 | OTTHUMT00000458857.1 | 580 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |
