Description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)
Synonyms
GalNAc-T6
Location
Chromosome 12: 51,351,247-51,392,867 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 19 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| GALNT6-002 | OTTHUMT00000469735.1 | 5207 | 622aa | OTTHUMP00000273024 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8813 | Q8NCL4 | |
| GALNT6-001 | OTTHUMT00000469736.1 | 2809 | 622aa | OTTHUMP00000273025 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8813 | Q8NCL4 | |
| GALNT6-015 | OTTHUMT00000469744.2 | 697 | 55aa | OTTHUMP00000273032 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT6-016 | OTTHUMT00000469807.2 | 626 | 39aa | OTTHUMP00000273060 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT6-007 | OTTHUMT00000469742.2 | 582 | 68aa | OTTHUMP00000273030 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT6-012 | OTTHUMT00000469743.2 | 581 | 62aa | OTTHUMP00000273031 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT6-017 | OTTHUMT00000469808.2 | 574 | 23aa | OTTHUMP00000273061 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT6-008 | OTTHUMT00000469739.2 | 567 | 137aa | OTTHUMP00000273027 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT6-011 | OTTHUMT00000469740.2 | 554 | 123aa | OTTHUMP00000273028 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT6-009 | OTTHUMT00000469745.2 | 548 | 23aa | OTTHUMP00000273033 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT6-005 | OTTHUMT00000469741.2 | 538 | 78aa | OTTHUMP00000273029 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GALNT6-003 | OTTHUMT00000469738.1 | 1859 | 365aa | OTTHUMP00000273026 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| GALNT6-018 | OTTHUMT00000469809.1 | 557 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GALNT6-020 | OTTHUMT00000469810.1 | 555 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GALNT6-006 | OTTHUMT00000469746.1 | 549 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GALNT6-013 | OTTHUMT00000469747.1 | 494 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GALNT6-010 | OTTHUMT00000469748.1 | 476 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GALNT6-021 | OTTHUMT00000469811.1 | 372 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GALNT6-004 | OTTHUMT00000469737.1 | 2206 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
