Description
Sfi1 homolog, spindle assembly associated (yeast)
Synonyms
KIAA0542, PPP1R139, PISD
Location
Chromosome 22: 31,488,688-31,618,586 forward strand.
VEGA68:CM000684.2
About this gene
This gene has 29 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SFI1-001 | OTTHUMT00000075103.4 | 4162 | 1211aa | OTTHUMP00000028604 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43005 | - | |
| SFI1-023 | OTTHUMT00000337180.3 | 4002 | 1242aa | OTTHUMP00000206735 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43004 | A8K8P3 | |
| SFI1-014 | OTTHUMT00000315708.4 | 3739 | 1160aa | OTTHUMP00000195955 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58804 | - | |
| SFI1-026 | OTTHUMT00000342496.2 | 3579 | 1089aa | OTTHUMP00000208985 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3YTJ2 | |
| SFI1-024 | OTTHUMT00000337181.2 | 1817 | 605aa | OTTHUMP00000206736 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y5I7 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SFI1-009 | OTTHUMT00000127938.2 | 719 | 57aa | OTTHUMP00000199754 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SFI1-015 | OTTHUMT00000315709.2 | 449 | 79aa | OTTHUMP00000195956 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | X6RJF9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SFI1-025 | OTTHUMT00000337182.2 | 448 | 149aa | OTTHUMP00000206737 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7BZF3 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SFI1-027 | OTTHUMT00000353251.1 | 3311 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SFI1-003 | OTTHUMT00000127932.2 | 2625 | 489aa | OTTHUMP00000197955 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H7C2F1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SFI1-029 | OTTHUMT00000379938.1 | 2108 | 389aa | OTTHUMP00000227321 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E5RJU6 | |
| SFI1-017 | OTTHUMT00000315711.3 | 656 | 102aa | OTTHUMP00000199755 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WBU4 | |
| SFI1-013 | OTTHUMT00000127942.1 | 708 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SFI1-016 | OTTHUMT00000315710.1 | 596 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SFI1-028 | OTTHUMT00000353252.1 | 559 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SFI1-021 | OTTHUMT00000315715.2 | 545 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SFI1-011 | OTTHUMT00000127940.1 | 519 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SFI1-008 | OTTHUMT00000127937.1 | 372 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SFI1-002 | OTTHUMT00000127931.2 | 5250 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-006 | OTTHUMT00000127935.1 | 3019 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-004 | OTTHUMT00000127933.1 | 1485 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-005 | OTTHUMT00000127934.1 | 1453 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-018 | OTTHUMT00000315712.1 | 745 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-012 | OTTHUMT00000127941.1 | 735 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-020 | OTTHUMT00000315714.1 | 662 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-007 | OTTHUMT00000127936.1 | 651 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-022 | OTTHUMT00000315716.1 | 580 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-010 | OTTHUMT00000127939.2 | 567 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SFI1-019 | OTTHUMT00000315713.1 | 567 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
