Description
syntaxin 4
Synonyms
p35-2
Location
Chromosome 16: 31,032,889-31,042,975 forward strand.
VEGA68:CM000678.2
About this gene
This gene has 17 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| STX4-003 | OTTHUMT00000438720.3 | 1498 | 295aa | OTTHUMP00000257560 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS61916 | - | |
| STX4-001 | OTTHUMT00000255538.3 | 1481 | 297aa | OTTHUMP00000163238 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10700 | Q12846 | |
| STX4-018 | OTTHUMT00000473969.1 | 649 | 115aa | OTTHUMP00000274788 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WWW0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| STX4-005 | OTTHUMT00000317183.5 | 571 | 175aa | OTTHUMP00000258855 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JFM5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| STX4-006 | OTTHUMT00000317184.2 | 983 | 64aa | OTTHUMP00000254892 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| STX4-009 | OTTHUMT00000317187.3 | 842 | 64aa | OTTHUMP00000254891 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| STX4-002 | OTTHUMT00000317180.3 | 1588 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| STX4-016 | OTTHUMT00000433354.1 | 1377 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| STX4-017 | OTTHUMT00000433355.1 | 561 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| STX4-004 | OTTHUMT00000317182.1 | 1290 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| STX4-007 | OTTHUMT00000317185.1 | 1002 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| STX4-014 | OTTHUMT00000433352.2 | 846 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| STX4-013 | OTTHUMT00000433351.1 | 696 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| STX4-010 | OTTHUMT00000317188.1 | 610 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| STX4-011 | OTTHUMT00000317189.1 | 604 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| STX4-012 | OTTHUMT00000317190.1 | 564 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| STX4-008 | OTTHUMT00000317186.2 | 545 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
