Description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Synonyms
BAF57
Location
Chromosome 17: 40,624,962-40,648,508 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 19 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SMARCE1-001 | OTTHUMT00000257203.1 | 5840 | 411aa | OTTHUMP00000164519 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11370 | Q969G3 | |
| SMARCE1-006 | OTTHUMT00000257208.2 | 2124 | 77aa | OTTHUMP00000262066 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SMARCE1-012 | OTTHUMT00000447529.1 | 1569 | 393aa | OTTHUMP00000262057 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B4DGM3 | |
| SMARCE1-008 | OTTHUMT00000257210.2 | 1307 | 328aa | OTTHUMP00000164520 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SMARCE1-015 | OTTHUMT00000447532.1 | 1263 | 293aa | OTTHUMP00000262060 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SMARCE1-013 | OTTHUMT00000447531.1 | 1228 | 376aa | OTTHUMP00000262059 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SMARCE1-014 | OTTHUMT00000447530.1 | 1184 | 341aa | OTTHUMP00000262058 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SMARCE1-018 | OTTHUMT00000447533.2 | 1090 | 288aa | OTTHUMP00000262061 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QKS7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMARCE1-009 | OTTHUMT00000257211.2 | 631 | 177aa | OTTHUMP00000265134 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EMQ8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SMARCE1-019 | OTTHUMT00000447538.2 | 621 | 129aa | OTTHUMP00000262065 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QKX6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMARCE1-016 | OTTHUMT00000447535.2 | 554 | 153aa | OTTHUMP00000262062 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C0IMW8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMARCE1-010 | OTTHUMT00000257212.1 | 536 | 157aa | OTTHUMP00000164522 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C048 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SMARCE1-017 | OTTHUMT00000447536.1 | 449 | 101aa | OTTHUMP00000262063 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KT85 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMARCE1-011 | OTTHUMT00000447528.1 | 2384 | 52aa | OTTHUMP00000262056 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SMARCE1-007 | OTTHUMT00000257209.2 | 695 | 55aa | OTTHUMP00000262064 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SMARCE1-004 | OTTHUMT00000257206.1 | 2284 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCE1-003 | OTTHUMT00000257205.1 | 2128 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCE1-020 | OTTHUMT00000447534.1 | 534 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCE1-021 | OTTHUMT00000447537.1 | 476 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
