Description
actinin, alpha 4
Location
Chromosome 19: 38,647,649-38,731,583 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 13 transcripts (splice variants), 15 orthologues and 14 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ACTN4-001 | OTTHUMT00000268091.2 | 4963 | 911aa | OTTHUMP00000174445 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12518 | A0A0S2Z3G9 | |
| ACTN4-004 | OTTHUMT00000268094.1 | 3180 | 342aa | OTTHUMP00000174446 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C144 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ACTN4-010 | OTTHUMT00000459235.1 | 2102 | 692aa | OTTHUMP00000268325 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| ACTN4-012 | OTTHUMT00000459238.1 | 546 | 182aa | OTTHUMP00000268327 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EJH8 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ACTN4-013 | OTTHUMT00000459236.1 | 441 | 105aa | OTTHUMP00000268326 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EP19 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ACTN4-008 | OTTHUMT00000459234.1 | 2171 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ACTN4-011 | OTTHUMT00000459237.1 | 1561 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ACTN4-009 | OTTHUMT00000459233.1 | 1419 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ACTN4-002 | OTTHUMT00000268092.1 | 586 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ACTN4-007 | OTTHUMT00000459232.1 | 1729 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ACTN4-005 | OTTHUMT00000268095.1 | 877 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ACTN4-003 | OTTHUMT00000268093.1 | 654 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ACTN4-006 | OTTHUMT00000268096.1 | 544 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
