Description
actin-like 6A
Synonyms
INO80K, BAF53A, Actl6, Arp4
Location
Chromosome 3: 179,562,880-179,602,803 forward strand.
VEGA68:CM000665.2
About this gene
This gene has 15 transcripts (splice variants), 25 orthologues and 24 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ACTL6A-001 | OTTHUMT00000349599.1 | 1901 | 429aa | OTTHUMP00000212444 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3231 | O96019 | |
| ACTL6A-002 | OTTHUMT00000349600.2 | 1750 | 387aa | OTTHUMP00000212445 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43174 | - | |
| ACTL6A-009 | OTTHUMT00000349607.7 | 459 | 50aa | OTTHUMP00000212446 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JQT2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ACTL6A-004 | OTTHUMT00000349602.1 | 2719 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ACTL6A-003 | OTTHUMT00000349601.1 | 1869 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ACTL6A-011 | OTTHUMT00000349609.1 | 916 | 161aa | OTTHUMP00000212447 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H7C5S0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ACTL6A-014 | OTTHUMT00000349612.1 | 964 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ACTL6A-007 | OTTHUMT00000349605.2 | 622 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ACTL6A-012 | OTTHUMT00000349610.1 | 1077 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ACTL6A-006 | OTTHUMT00000349604.1 | 597 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ACTL6A-008 | OTTHUMT00000349606.1 | 591 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ACTL6A-015 | OTTHUMT00000349613.1 | 565 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ACTL6A-016 | OTTHUMT00000349614.1 | 457 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ACTL6A-018 | OTTHUMT00000349616.1 | 316 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ACTL6A-013 | OTTHUMT00000349611.1 | 174 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
