Description
PDZ and LIM domain 2 (mystique)
Location
Chromosome 8: 22,578,279-22,598,025 forward strand.
VEGA68:CM000670.2
About this gene
This gene has 21 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PDLIM2-004 | OTTHUMT00000334169.2 | 4592 | 366aa | OTTHUMP00000205199 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34860 | - | |
| PDLIM2-001 | OTTHUMT00000254648.3 | 2236 | 602aa | OTTHUMP00000162522 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6032 | Q96JY6 | |
| PDLIM2-005 | OTTHUMT00000334170.1 | 1463 | 278aa | OTTHUMP00000205200 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34861 | - | |
| PDLIM2-007 | OTTHUMT00000334172.2 | 1995 | 146aa | OTTHUMP00000275248 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B3KPU0 | |
| PDLIM2-020 | OTTHUMT00000475133.1 | 1847 | 352aa | OTTHUMP00000275246 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q96JY6 | |
| PDLIM2-002 | OTTHUMT00000334167.1 | 1491 | 352aa | OTTHUMP00000205197 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q96JY6 | |
| PDLIM2-003 | OTTHUMT00000334168.1 | 1487 | 352aa | OTTHUMP00000205198 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q96JY6 | |
| PDLIM2-009 | OTTHUMT00000334174.8 | 845 | 254aa | OTTHUMP00000205203 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JS55 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM2-008 | OTTHUMT00000334173.2 | 757 | 235aa | OTTHUMP00000205202 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JSR2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM2-013 | OTTHUMT00000334178.8 | 728 | 180aa | OTTHUMP00000205207 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM2-019 | OTTHUMT00000375864.2 | 701 | 72aa | OTTHUMP00000275249 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PDLIM2-023 | OTTHUMT00000476302.1 | 599 | 146aa | OTTHUMP00000275519 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B3KPU0 | |
| PDLIM2-012 | OTTHUMT00000334177.2 | 578 | 173aa | OTTHUMP00000205206 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM2-011 | OTTHUMT00000334176.8 | 507 | 153aa | OTTHUMP00000205205 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM2-022 | OTTHUMT00000476301.3 | 209 | 18aa | OTTHUMP00000275518 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDLIM2-018 | OTTHUMT00000375862.1 | 4644 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PDLIM2-017 | OTTHUMT00000375861.1 | 2198 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PDLIM2-016 | OTTHUMT00000334181.2 | 894 | 137aa | OTTHUMP00000275247 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PDLIM2-014 | OTTHUMT00000334179.1 | 880 | 38aa | OTTHUMP00000205208 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PDLIM2-021 | OTTHUMT00000475134.1 | 6559 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PDLIM2-015 | OTTHUMT00000334180.1 | 563 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
