Description
vesicle-associated membrane protein 1 (synaptobrevin 1)
Synonyms
VAMP-1
Location
Chromosome 12: 6,462,237-6,470,987 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 10 transcripts (splice variants), 5 orthologues and 4 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| VAMP1-001 | OTTHUMT00000399076.2 | 3449 | 117aa | OTTHUMP00000238453 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31731 | - | |
| VAMP1-002 | OTTHUMT00000399078.1 | 1113 | 118aa | OTTHUMP00000238455 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41740 | P23763 | |
| VAMP1-003 | OTTHUMT00000399077.2 | 1068 | 116aa | OTTHUMP00000238454 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44809 | - | |
| VAMP1-011 | OTTHUMT00000399269.1 | 747 | 116aa | OTTHUMP00000238560 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73422 | F5GZV7 | |
| VAMP1-004 | OTTHUMT00000399271.1 | 986 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| VAMP1-005 | OTTHUMT00000399270.1 | 970 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| VAMP1-009 | OTTHUMT00000399268.1 | 759 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| VAMP1-007 | OTTHUMT00000399274.1 | 565 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| VAMP1-008 | OTTHUMT00000399273.1 | 578 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| VAMP1-010 | OTTHUMT00000399272.1 | 567 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
