Description
protocadherin 15
Location
Chromosome 10: 53,808,522-53,810,664 reverse strand.
About this transcript
This transcript has 2 exons.
Gene
This transcript is a product of gene OTTHUMG00000018259 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
PCDH15-008 | OTTHUMT00000291336.2 | 9237 | 1677aa | OTTHUMP00000185546 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73135 | A9Z1W1 | |
PCDH15-022 | OTTHUMT00000476339.1 | 7032 | 1962aa | OTTHUMP00000275584 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73137 | A2A3D8 | |
PCDH15-011 | OTTHUMT00000291338.1 | 7017 | 1957aa | OTTHUMP00000185547 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44404 | A2A3E7 | |
PCDH15-012 | OTTHUMT00000291339.1 | 7002 | 1952aa | OTTHUMP00000185548 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44403 | A2A3E6 | |
PCDH15-013 | OTTHUMT00000291340.2 | 6942 | 1932aa | OTTHUMP00000185549 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44401 | A2A3E8 | |
PCDH15-001 | OTTHUMT00000048121.2 | 6845 | 1955aa | OTTHUMP00000019623 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7248 | Q96QU1 | |
PCDH15-029 | OTTHUMT00000476356.1 | 6804 | 1886aa | OTTHUMP00000275595 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73134 | E7EM53 | |
PCDH15-017 | OTTHUMT00000291344.2 | 6425 | 1539aa | OTTHUMP00000185553 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44400 | A2A3E3 | |
PCDH15-007 | OTTHUMT00000291335.2 | 6329 | 1790aa | OTTHUMP00000185545 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73138 | A0A087WZN9 | |
PCDH15-027 | OTTHUMT00000476352.1 | 5700 | 1682aa | OTTHUMP00000275591 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73136 | A0A087X1T6 | |
PCDH15-005 | OTTHUMT00000476338.1 | 5917 | 1783aa | OTTHUMP00000275583 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
PCDH15-021 | OTTHUMT00000476351.1 | 5846 | 1675aa | OTTHUMP00000275590 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
PCDH15-018 | OTTHUMT00000291345.6 | 5401 | 1150aa | OTTHUMP00000199503 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B7ZBT8 | |
PCDH15-002 | OTTHUMT00000048122.2 | 4230 | 961aa | OTTHUMP00000019624 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
PCDH15-014 | OTTHUMT00000291341.3 | 3948 | 981aa | OTTHUMP00000185550 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A2A3E4 | |
PCDH15-016 | OTTHUMT00000291343.1 | 3177 | 719aa | OTTHUMP00000185552 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A2A3E5 | |
PCDH15-015 | OTTHUMT00000291342.2 | 2970 | 650aa | OTTHUMP00000185551 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A2A3E1 | |
PCDH15-009 | OTTHUMT00000291337.3 | 1896 | 416aa | OTTHUMP00000275582 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WX70 | |
PCDH15-028 | OTTHUMT00000476355.1 | 1461 | 460aa | OTTHUMP00000275594 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WZN4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
PCDH15-024 | OTTHUMT00000476343.1 | 1143 | 37aa | OTTHUMP00000275587 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
PCDH15-025 | OTTHUMT00000476354.2 | 580 | 72aa | OTTHUMP00000275593 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
PCDH15-004 | OTTHUMT00000257080.2 | 448 | 92aa | OTTHUMP00000164412 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
PCDH15-023 | OTTHUMT00000476344.1 | 5987 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
PCDH15-019 | OTTHUMT00000291346.5 | 3472 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
PCDH15-026 | OTTHUMT00000476353.1 | 6937 | 654aa | OTTHUMP00000275592 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E7EMG8 | |
PCDH15-020 | OTTHUMT00000328790.1 | 6931 | 654aa | OTTHUMP00000202811 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E7EMG8 | |
PCDH15-006 | OTTHUMT00000291334.3 | 3357 | 329aa | OTTHUMP00000199502 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E7EM97 | |
PCDH15-003 | OTTHUMT00000104670.4 | 3469 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
PCDH15-010 | OTTHUMT00000104707.2 | 754 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |