Description
vacuolar protein sorting 13 homolog A (S. cerevisiae)
Location
Chromosome 9: 77,318,521-77,339,182 forward strand.
About this transcript
This transcript has 7 exons and is annotated with 3 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000020055 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
VPS13A-005 | OTTHUMT00000052753.2 | 15320 | 3174aa | OTTHUMP00000021513 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6655 | Q96RL7 | |
VPS13A-010 | OTTHUMT00000402199.1 | 11145 | 3135aa | OTTHUMP00000240059 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55321 | - | |
VPS13A-001 | OTTHUMT00000052749.2 | 10269 | 3069aa | OTTHUMP00000240008 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47983 | - | |
VPS13A-006 | OTTHUMT00000052754.1 | 9967 | 3095aa | OTTHUMP00000021514 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6656 | - | |
VPS13A-002 | OTTHUMT00000052750.2 | 2781 | 383aa | OTTHUMP00000021512 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
VPS13A-009 | OTTHUMT00000402091.1 | 2262 | 110aa | OTTHUMP00000240011 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
VPS13A-004 | OTTHUMT00000052752.2 | 1155 | 110aa | OTTHUMP00000240010 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
VPS13A-003 | OTTHUMT00000052751.2 | 324 | 41aa | OTTHUMP00000240012 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
VPS13A-012 | OTTHUMT00000402200.2 | 255 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
VPS13A-007 | OTTHUMT00000052755.2 | 2001 | 177aa | OTTHUMP00000240009 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
VPS13A-011 | OTTHUMT00000402201.1 | 2702 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
VPS13A-008 | OTTHUMT00000052756.1 | 510 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
VPS13A-014 | OTTHUMT00000402203.1 | 753 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
VPS13A-013 | OTTHUMT00000402202.1 | 390 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |