Description
splicing factor 1
Location
Chromosome 11: 64,776,046-64,778,037 reverse strand.
About this transcript
This transcript has 2 exons.
Gene
This transcript is a product of gene OTTHUMG00000066833 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
SF1-005 | OTTHUMT00000143242.1 | 3470 | 639aa | OTTHUMP00000069752 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31599 | Q15637 | |
SF1-001 | OTTHUMT00000143238.1 | 3094 | 638aa | OTTHUMP00000069749 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8080 | A0A024R5D9 | |
SF1-006 | OTTHUMT00000143243.1 | 2947 | 673aa | OTTHUMP00000069753 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53661 | - | |
SF1-004 | OTTHUMT00000143241.2 | 2854 | 571aa | OTTHUMP00000069751 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44642 | A0A024R566 | |
SF1-002 | OTTHUMT00000143239.2 | 2850 | 548aa | OTTHUMP00000069750 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8081 | A0A024R588 | |
SF1-016 | OTTHUMT00000157360.4 | 2317 | 613aa | OTTHUMP00000196697 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53660 | - | |
SF1-020 | OTTHUMT00000348427.2 | 875 | 291aa | OTTHUMP00000211951 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C561 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
SF1-019 | OTTHUMT00000343496.1 | 843 | 180aa | OTTHUMP00000209484 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
SF1-014 | OTTHUMT00000143251.2 | 767 | 200aa | OTTHUMP00000069754 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7BZT1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
SF1-018 | OTTHUMT00000331962.2 | 475 | 62aa | OTTHUMP00000204263 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J792 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SF1-008 | OTTHUMT00000143245.2 | 3120 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SF1-003 | OTTHUMT00000143240.3 | 2778 | 110aa | OTTHUMP00000199617 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
SF1-011 | OTTHUMT00000143248.2 | 623 | 51aa | OTTHUMP00000199618 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
SF1-021 | OTTHUMT00000487945.1 | 591 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SF1-017 | OTTHUMT00000315957.1 | 584 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SF1-013 | OTTHUMT00000143250.1 | 455 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SF1-007 | OTTHUMT00000143244.1 | 983 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SF1-015 | OTTHUMT00000143252.1 | 802 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SF1-012 | OTTHUMT00000143249.1 | 755 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SF1-009 | OTTHUMT00000143246.1 | 719 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SF1-010 | OTTHUMT00000143247.1 | 632 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |