Description
SATB homeobox 1
Location
Chromosome 3: 18,349,541-18,351,531 reverse strand.
About this transcript
This transcript has 2 exons.
Gene
This transcript is a product of gene OTTHUMG00000129890 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
SATB1-001 | OTTHUMT00000252138.4 | 7810 | 763aa | OTTHUMP00000160335 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2631 | A0A024R2H1 | |
SATB1-004 | OTTHUMT00000339360.2 | 4589 | 795aa | OTTHUMP00000207689 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56242 | - | |
SATB1-002 | OTTHUMT00000339358.1 | 3755 | 763aa | OTTHUMP00000207687 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2631 | A0A024R2H1 | |
SATB1-017 | OTTHUMT00000339415.5 | 1000 | 138aa | OTTHUMP00000275375 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WW22 | |
SATB1-008 | OTTHUMT00000339364.2 | 975 | 224aa | OTTHUMP00000207691 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JP21 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SATB1-015 | OTTHUMT00000339371.3 | 939 | 172aa | OTTHUMP00000207696 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SATB1-009 | OTTHUMT00000339365.3 | 626 | 82aa | OTTHUMP00000248411 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
SATB1-006 | OTTHUMT00000339362.3 | 594 | 166aa | OTTHUMP00000207690 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SATB1-011 | OTTHUMT00000339367.2 | 583 | 116aa | OTTHUMP00000207692 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SATB1-012 | OTTHUMT00000339368.3 | 579 | 70aa | OTTHUMP00000207693 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SATB1-014 | OTTHUMT00000339370.2 | 564 | 129aa | OTTHUMP00000207695 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SATB1-016 | OTTHUMT00000339372.4 | 558 | 166aa | OTTHUMP00000275374 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WW75 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SATB1-013 | OTTHUMT00000339369.3 | 464 | 8aa | OTTHUMP00000207694 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SATB1-005 | OTTHUMT00000339361.1 | 3053 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SATB1-003 | OTTHUMT00000470760.1 | 4200 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SATB1-019 | OTTHUMT00000339418.1 | 551 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SATB1-010 | OTTHUMT00000339366.1 | 477 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SATB1-018 | OTTHUMT00000339416.1 | 406 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SATB1-007 | OTTHUMT00000339419.3 | 361 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |