Description
cadherin 1, type 1, E-cadherin (epithelial)
Location
Chromosome 16: 68,763,294-68,833,538 forward strand.
About this transcript
This transcript has 15 exons.
Gene
This transcript is a product of gene OTTHUMG00000137561 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
CDH1-001 | OTTHUMT00000268897.2 | 4889 | 882aa | OTTHUMP00000174868 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10869 | A0A0U2ZQU7 | |
CDH1-004 | OTTHUMT00000433695.1 | 2567 | 821aa | OTTHUMP00000255076 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82005 | - | |
CDH1-008 | OTTHUMT00000433691.1 | 3304 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
CDH1-005 | OTTHUMT00000433692.1 | 4138 | 537aa | OTTHUMP00000255074 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BNC6 | |
CDH1-006 | OTTHUMT00000433696.1 | 2661 | 414aa | OTTHUMP00000255077 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BVI7 | |
CDH1-010 | OTTHUMT00000433700.2 | 736 | 155aa | OTTHUMP00000259208 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QKP1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
CDH1-002 | OTTHUMT00000433697.1 | 2759 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CDH1-003 | OTTHUMT00000433698.1 | 969 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CDH1-007 | OTTHUMT00000433699.1 | 581 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CDH1-013 | OTTHUMT00000433703.1 | 952 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CDH1-012 | OTTHUMT00000433701.1 | 352 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CDH1-011 | OTTHUMT00000433702.1 | 282 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |