Transcript: APOD-001 OTTHUMT00000342004.1

Description

apolipoprotein D

Location

About this transcript

This transcript has 5 exons and is annotated with 21 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
APOD-001	OTTHUMT00000342004.1	1130	189aa	OTTHUMP00000208785	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33925	P05090
APOD-005	OTTHUMT00000342008.2	782	215aa	OTTHUMP00000208788	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JF17	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
APOD-004	OTTHUMT00000342007.2	681	149aa	OTTHUMP00000208787	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JX71	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
APOD-003	OTTHUMT00000342006.1	950	108aa	OTTHUMP00000208786	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
APOD-002	OTTHUMT00000342005.1	1210	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,130 bps Translation length: 189 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33925

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 20/11/2008)

Alternative symbols

AC069213.3-001

Other assemblies

This transcript maps to 195,568,702-195,584,205 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000343267

Curation Method

Manual annotation from Havana