Transcript: COL6A5-004 OTTHUMT00000357221.1

Description

collagen, type VI, alpha 5

Location

About this transcript

This transcript has 7 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COL6A5-003	OTTHUMT00000357220.2	3138	778aa	OTTHUMP00000216412	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COL6A5-002	OTTHUMT00000357013.2	1780	443aa	OTTHUMP00000216988	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COL6A5-004	OTTHUMT00000357221.1	1770	557aa	OTTHUMP00000216413	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COL6A5-001	OTTHUMT00000357014.1	9226	2615aa	OTTHUMP00000216291	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A8TX70

Summary

Statistics

Exons: 7 Transcript length: 1,770 bps Translation length: 557 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 26/06/2009)

Alternative symbols

RP11-715A9.1-004

Remarks

Supporting allele has a single nucleotide deltion in the second to last exon

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 130,440,510-130,484,156 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000373157

Curation Method

Manual annotation from Havana