Transcript: RP11-231C14.4-005 OTTHUMT00000409308.1

Description

novel protein similar to nuclear pore complex-interacting protein-like family protein

Location

Chromosome 16: 29,485,713-29,505,816 reverse strand.

About this transcript

This transcript has 9 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000163547 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RP11-231C14.4-001	OTTHUMT00000409305.1	1861	595aa	OTTHUMP00000243891	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RP11-231C14.4-005	OTTHUMT00000409308.1	910	40aa	OTTHUMP00000243894	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
RP11-231C14.4-007	OTTHUMT00000409307.1	797	68aa	OTTHUMP00000243893	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N5EDM5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RP11-231C14.4-004	OTTHUMT00000409310.1	710	24aa	OTTHUMP00000243896	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RP11-231C14.4-003	OTTHUMT00000409312.1	675	49aa	OTTHUMP00000243897	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
RP11-231C14.4-008	OTTHUMT00000409309.1	464	78aa	OTTHUMP00000243895	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RP11-231C14.4-006	OTTHUMT00000409311.1	611	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 910 bps Translation length: 40 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 23/02/2011)

Other assemblies

This transcript maps to 29,485,713-29,505,816 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000551448

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: RP11-231C14.4-005 OTTHUMT00000409308.1

Summary

Transcript-based displays