Description
brain-derived neurotrophic factor
Location
Chromosome 11: 27,654,893-27,720,723 reverse strand.
About this transcript
This transcript has 2 exons and is annotated with 21 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000178797 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
BDNF-016 | OTTHUMT00000388135.2 | 4766 | 247aa | OTTHUMP00000232040 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-015 | OTTHUMT00000388134.2 | 4532 | 247aa | OTTHUMP00000232039 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-018 | OTTHUMT00000388138.1 | 4340 | 255aa | OTTHUMP00000232043 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7865 | - | |
BDNF-011 | OTTHUMT00000388097.1 | 4125 | 247aa | OTTHUMP00000232014 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-002 | OTTHUMT00000388085.2 | 4071 | 247aa | OTTHUMP00000232005 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-008 | OTTHUMT00000388102.2 | 4059 | 329aa | OTTHUMP00000232019 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44558 | - | |
BDNF-010 | OTTHUMT00000388096.1 | 4018 | 247aa | OTTHUMP00000232013 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-012 | OTTHUMT00000388098.1 | 4000 | 247aa | OTTHUMP00000232015 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-003 | OTTHUMT00000388105.1 | 3988 | 247aa | OTTHUMP00000232022 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-013 | OTTHUMT00000388136.2 | 3979 | 262aa | OTTHUMP00000232041 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41628 | - | |
BDNF-004 | OTTHUMT00000388104.1 | 3930 | 247aa | OTTHUMP00000232021 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-009 | OTTHUMT00000388099.1 | 3918 | 247aa | OTTHUMP00000232016 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-014 | OTTHUMT00000388137.1 | 3878 | 247aa | OTTHUMP00000232042 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-001 | OTTHUMT00000388086.1 | 3829 | 247aa | OTTHUMP00000232006 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-007 | OTTHUMT00000388101.1 | 3776 | 247aa | OTTHUMP00000232018 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7866 | A0A0E3SU01 | |
BDNF-017 | OTTHUMT00000388139.2 | 1035 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
BDNF-006 | OTTHUMT00000388100.2 | 4176 | 77aa | OTTHUMP00000232017 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
BDNF-005 | OTTHUMT00000388103.1 | 4030 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |