Description
aprataxin
Location
Chromosome 9: 32,973,376-33,001,641 reverse strand.
About this transcript
This transcript has 7 exons and is annotated with 11 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000019759 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| APTX-002 | OTTHUMT00000052027.3 | 2023 | 306aa | OTTHUMP00000021189 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6532 | - | |
| APTX-006 | OTTHUMT00000355312.1 | 1068 | 302aa | OTTHUMP00000215291 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56568 | - | |
| APTX-011 | OTTHUMT00000355317.2 | 2106 | 342aa | OTTHUMP00000215296 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| APTX-003 | OTTHUMT00000052028.2 | 1820 | 356aa | OTTHUMP00000021190 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q7Z2E3 | |
| APTX-021 | OTTHUMT00000355327.2 | 1740 | 284aa | OTTHUMP00000215305 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| APTX-017 | OTTHUMT00000355323.1 | 1455 | 342aa | OTTHUMP00000215302 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| APTX-007 | OTTHUMT00000355313.1 | 1345 | 342aa | OTTHUMP00000215292 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| APTX-025 | OTTHUMT00000355331.2 | 687 | 216aa | OTTHUMP00000215306 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JZ40 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| APTX-030 | OTTHUMT00000355336.1 | 599 | 198aa | OTTHUMP00000215310 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8W6G5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| APTX-026 | OTTHUMT00000355332.2 | 568 | 155aa | OTTHUMP00000215307 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J8U3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| APTX-020 | OTTHUMT00000355326.1 | 1629 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| APTX-012 | OTTHUMT00000355318.1 | 2101 | 49aa | OTTHUMP00000215297 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| APTX-009 | OTTHUMT00000355315.1 | 2099 | 49aa | OTTHUMP00000215294 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| APTX-001 | OTTHUMT00000052026.2 | 1991 | 85aa | OTTHUMP00000021188 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q6JV79 | |
| APTX-010 | OTTHUMT00000355316.1 | 1986 | 49aa | OTTHUMP00000215295 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| APTX-004 | OTTHUMT00000052029.2 | 1881 | 49aa | OTTHUMP00000021191 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| APTX-015 | OTTHUMT00000355321.1 | 1879 | 192aa | OTTHUMP00000215300 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| APTX-016 | OTTHUMT00000355322.1 | 1874 | 49aa | OTTHUMP00000215301 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| APTX-014 | OTTHUMT00000355320.1 | 1764 | 85aa | OTTHUMP00000215299 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q6JV79 | |
| APTX-013 | OTTHUMT00000355319.1 | 1759 | 49aa | OTTHUMP00000215298 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| APTX-008 | OTTHUMT00000355314.1 | 1313 | 49aa | OTTHUMP00000215293 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| APTX-028 | OTTHUMT00000355334.2 | 952 | 74aa | OTTHUMP00000215309 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WBM3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| APTX-019 | OTTHUMT00000355325.1 | 684 | 99aa | OTTHUMP00000215304 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E7EVB7 | |
| APTX-018 | OTTHUMT00000355324.1 | 679 | 63aa | OTTHUMP00000215303 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E7EUY4 | |
| APTX-027 | OTTHUMT00000355333.1 | 674 | 52aa | OTTHUMP00000215308 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WBD6 | |
| APTX-023 | OTTHUMT00000355329.1 | 645 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| APTX-032 | OTTHUMT00000355338.1 | 556 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| APTX-022 | OTTHUMT00000355328.1 | 542 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| APTX-024 | OTTHUMT00000355330.1 | 397 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| APTX-031 | OTTHUMT00000355337.1 | 633 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| APTX-029 | OTTHUMT00000355335.1 | 547 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
