This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: Hacd1 OTTMUSG00000011400

.

Description

3-hydroxyacyl-CoA dehydratase 1

Location

Chromosome 2: 13,850,282-14,056,135 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 4 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hacd1-001	OTTMUST00000026681.2	993	248aa	OTTMUSP00000012194	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50505	B9EHK9
Hacd1-003	OTTMUST00000026683.2	871	165aa	OTTMUSP00000012195	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50504	A2AQ81
Hacd1-004	OTTMUST00000129595.1	936	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Hacd1-002	OTTMUST00000026682.2	1876	165aa	OTTMUSP00000069494	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS50504	A2AQ81

.

Summary

.

.

Gene-based displays