Description
lin-54 homolog (C. elegans)
Location
Chromosome 5: 100,441,918-100,500,639 reverse strand.
About this gene
This gene has 10 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Lin54-003 | OTTMUST00000085557.1 | 4592 | 749aa | OTTMUSP00000046234 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS19462 | Q571G4 | |
| Lin54-001 | OTTMUST00000085546.1 | 4451 | 749aa | OTTMUSP00000046226 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS19462 | Q571G4 | |
| Lin54-005 | OTTMUST00000085559.1 | 4056 | 528aa | OTTMUSP00000046235 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Lin54-006 | OTTMUST00000085560.1 | 3869 | 528aa | OTTMUSP00000046236 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Lin54-007 | OTTMUST00000085561.1 | 3734 | 528aa | OTTMUSP00000046237 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Lin54-008 | OTTMUST00000085562.1 | 2760 | 660aa | OTTMUSP00000046238 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Lin54-002 | OTTMUST00000085556.1 | 3733 | 98aa | OTTMUSP00000046233 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Lin54-009 | OTTMUST00000085563.1 | 2686 | 243aa | OTTMUSP00000046239 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Lin54-010 | OTTMUST00000085564.1 | 752 | 146aa | OTTMUSP00000046240 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Lin54-004 | OTTMUST00000085558.1 | 1803 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
