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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
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Gene: Sssca1 OTTMUSG00000035065

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Description

Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)

Location

Chromosome 19: 5,728,088-5,731,732 reverse strand.

About this gene

This gene has 6 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sssca1-001	OTTMUST00000089211.1	693	199aa	OTTMUSP00000048708	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29479	Q545N1
Sssca1-002	OTTMUST00000089212.1	705	88aa	OTTMUSP00000048709	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Sssca1-003	OTTMUST00000089213.1	526	59aa	OTTMUSP00000048710	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sssca1-006	OTTMUST00000089216.1	2532	199aa	OTTMUSP00000048711	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS29479	Q545N1
Sssca1-004	OTTMUST00000089214.1	826	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sssca1-005	OTTMUST00000089215.1	610	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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