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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
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Gene: Pcdha11 OTTMUSG00000050625

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Description

protocadherin alpha 11

Location

Chromosome 18: 37,010,712-37,187,657 forward strand.

About this gene

This gene has 5 transcripts (splice variants), 20 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pcdha11-001	OTTMUST00000128349.1	5360	950aa	OTTMUSP00000069056	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37779	Q91Y19
Pcdha11-005	OTTMUST00000128350.1	4583	904aa	OTTMUSP00000069057	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0A6YY44
Pcdha11-002	OTTMUST00000128351.2	625	209aa	OTTMUSP00000069058	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0A6YX38	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Pcdha11-004	OTTMUST00000128348.1	4038	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pcdha11-003	OTTMUST00000128347.1	3323	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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