Description
serrate RNA effector molecule homolog (Arabidopsis)
Location
Chromosome 5: 137,295,711-137,307,666 reverse strand.
About this gene
This gene has 16 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Srrt-001 | OTTMUST00000135100.1 | 2988 | 868aa | OTTMUSP00000071560 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS80440 | - | |
| Srrt-002 | OTTMUST00000135101.1 | 2972 | 864aa | OTTMUSP00000071561 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS80439 | - | |
| Srrt-020 | OTTMUST00000135192.1 | 1660 | 517aa | OTTMUSP00000071581 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0G2JDF8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Srrt-003 | OTTMUST00000135103.2 | 808 | 269aa | OTTMUSP00000071563 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0G2JG65 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Srrt-019 | OTTMUST00000135191.1 | 3001 | 467aa | OTTMUSP00000071580 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0G2JDN3 | |
| Srrt-015 | OTTMUST00000135110.1 | 931 | 239aa | OTTMUSP00000071565 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0G2JDF1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Srrt-016 | OTTMUST00000135109.1 | 599 | 52aa | OTTMUSP00000071564 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0G2JG75 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Srrt-007 | OTTMUST00000135115.1 | 476 | 50aa | OTTMUSP00000071567 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0G2JE73 | |
| Srrt-018 | OTTMUST00000135112.1 | 2004 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Srrt-011 | OTTMUST00000135107.1 | 884 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Srrt-012 | OTTMUST00000135105.1 | 835 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Srrt-009 | OTTMUST00000135113.1 | 767 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Srrt-013 | OTTMUST00000135104.1 | 666 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Srrt-010 | OTTMUST00000135108.1 | 600 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Srrt-017 | OTTMUST00000135111.1 | 516 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Srrt-014 | OTTMUST00000135106.1 | 416 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
