Description
rhodopsin
Location
Chromosome 6: 115,931,748-115,940,036 forward strand.
About this gene
This gene has 8 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
Rho-001 | OTTMUST00000139898.4 | 4621 | 348aa | OTTMUSP00000073385 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS20446 | P15409 | |
Rho-005 | OTTMUST00000139903.2 | 939 | 189aa | OTTMUSP00000073387 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0N4SV48 | |
Rho-003 | OTTMUST00000139902.2 | 870 | 203aa | OTTMUSP00000073386 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0N4SUP8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Rho-002 | OTTMUST00000139899.2 | 2244 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
Rho-006 | OTTMUST00000139904.2 | 883 | 54aa | OTTMUSP00000073388 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0N4SWC6 | |
Rho-008 | OTTMUST00000139905.1 | 1186 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Rho-007 | OTTMUST00000139906.1 | 911 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Rho-004 | OTTMUST00000139901.1 | 683 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |