Description
protocadherin 11 X-linked
Location
Chromosome X: 120,290,259-120,910,619 forward strand.
About this gene
This gene has 8 transcripts (splice variants), 12 orthologues and 11 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Pcdh11x-001 | OTTMUST00000044643.4 | 8607 | 1320aa | OTTMUSP00000020068 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS72426 | B1AZR7 | |
| Pcdh11x-007 | OTTMUST00000129050.1 | 9097 | 1338aa | OTTMUSP00000069374 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6ZNL5 | |
| Pcdh11x-006 | OTTMUST00000129051.2 | 5394 | 1026aa | OTTMUSP00000069375 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0A6YWK0 | |
| Pcdh11x-003 | OTTMUST00000129047.2 | 4454 | 1338aa | OTTMUSP00000069372 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6ZNL5 | |
| Pcdh11x-005 | OTTMUST00000129052.1 | 1491 | 496aa | OTTMUSP00000069376 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q2TJH7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pcdh11x-004 | OTTMUST00000129049.1 | 4402 | 1128aa | OTTMUSP00000069373 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0JNT1 | |
| Pcdh11x-002 | OTTMUST00000044644.5 | 1635 | 304aa | OTTMUSP00000063292 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q2TJH9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Pcdh11x-008 | OTTMUST00000129048.1 | 2145 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
