This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: Pak1 OTTMUSG00000021135

.

Description

p21 CDKN1A-activated kinase 1

Location

Chromosome 7: 97,788,541-97,912,381 forward strand.

About this gene

This gene has 6 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pak1-001	OTTMUST00000050033.1	3065	544aa	OTTMUSP00000023295	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21464	G5E884
Pak1-003	OTTMUST00000144026.1	2794	544aa	OTTMUSP00000075088	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21464	G5E884
Pak1-004	OTTMUST00000144027.1	508	118aa	OTTMUSP00000075089	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RQ87	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pak1-002	OTTMUST00000050034.2	2709	178aa	OTTMUSP00000065169	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	S4R2K7
Pak1-006	OTTMUST00000144028.1	952	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pak1-005	OTTMUST00000144025.1	911	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays