This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: H2-Q5 OTTMUSG00000037188

.

Description

histocompatibility 2, Q region locus 5

Location

Chromosome 17: 35,394,126-35,397,800 forward strand.

View alleles of this gene on alternate assemblies

About this gene

This gene has 3 transcripts (splice variants), 2 gene alleles, 136 orthologues and 53 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
H2-Q5-001	OTTMUST00000095866.4	998	332aa	OTTMUSP00000067393	<p>Pseudogene loci in one genome (e.g. the reference) but coding in other genomes (i.e. non-reference) due to short or large scale genomic variation in some individuals/haplotypes/strains in a given population/species. It can be known elsewhere as segregating pseudogenes or SPGs.</p>Polymorphic pseudogene	-
H2-Q5-003	OTTMUST00000119762.1	172	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
H2-Q5-002	OTTMUST00000095865.1	1156	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

.

Summary

.

.

Gene-based displays