Description
PTPRF interacting protein, binding protein 1 (liprin beta 1)
Location
Chromosome 6: 146,888,487-147,032,025 forward strand.
View alleles of this gene on alternate assemblies
About this gene
This gene has 13 transcripts (splice variants) and 1 gene allele.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Ppfibp1-001 | OTTMUST00000055355.1 | 4851 | 969aa | OTTMUSP00000026500 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS39715 | Q8C8U0 | |
| Ppfibp1-002 | OTTMUST00000055356.1 | 4782 | 980aa | OTTMUSP00000026501 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS51958 | - | |
| Ppfibp1-009 | OTTMUST00000055363.2 | 761 | 254aa | OTTMUSP00000026503 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Ppfibp1-006 | OTTMUST00000055360.3 | 727 | 242aa | OTTMUSP00000026502 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Ppfibp1-010 | OTTMUST00000055364.3 | 579 | 193aa | OTTMUSP00000026504 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Ppfibp1-013 | OTTMUST00000141006.2 | 547 | 130aa | OTTMUSP00000073751 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Ppfibp1-012 | OTTMUST00000141005.2 | 530 | 25aa | OTTMUSP00000073750 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Ppfibp1-003 | OTTMUST00000055357.3 | 3899 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Ppfibp1-007 | OTTMUST00000055361.3 | 700 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Ppfibp1-004 | OTTMUST00000055358.3 | 5118 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ppfibp1-005 | OTTMUST00000055359.1 | 3915 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ppfibp1-011 | OTTMUST00000141007.1 | 1218 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ppfibp1-008 | OTTMUST00000055362.1 | 724 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
