Transcript: AC113029.1-001 OTTMUST00000058559.2

Description

novel transcript, antisense Caln1

Location

Chromosome 5: 130,378,778-130,384,630 reverse strand.

About this transcript

This transcript has 3 exons.

Gene

This transcript is a product of gene OTTMUSG00000023960 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
AC113029.1-001	OTTMUST00000058559.2	705	No protein	-	<p>Genes or transcripts that overlap any coding exon of a locus on the opposite strand. It also encompasses antisense regulation of a coding gene that have been reported in the literature.</p>Antisense	-

Summary

Statistics

Exons: 3 Transcript length: 705 bps

Class

antisense [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 29/01/2015 (Created on 21/03/2007)

Remarks

previously annotated as a known cds (novel protein (A330070K13Rik). this was solely based on Trembl protein Tr:Q8CA53.1 as evidence and has CCDS57385.1 mapping perfectly. gdr found no pfam match, and no reviewed protein matching either; it is hard to find any conservation of the exons or M and there are no RNAseq support for the CDS; discussed this with John. - gdr 28/01/2015

Other assemblies

This transcript maps to 130,378,778-130,384,630 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000200886

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: AC113029.1-001 OTTMUST00000058559.2

Summary

Transcript-based displays