Transcript: Vwa5a-007 OTTMUST00000067838.1

Description

von Willebrand factor A domain containing 5A

Location

Chromosome 9: 38,736,185-38,741,920 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000027411 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Vwa5a-001	OTTMUST00000067812.2	4157	793aa	OTTMUSP00000034182	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23024	Q99KC8
Vwa5a-002	OTTMUST00000067813.2	3502	793aa	OTTMUSP00000034183	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23024	Q99KC8
Vwa5a-003	OTTMUST00000067834.2	425	38aa	OTTMUSP00000034194	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Vwa5a-007	OTTMUST00000067838.1	775	137aa	OTTMUSP00000034195	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Vwa5a-005	OTTMUST00000067836.1	647	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Vwa5a-006	OTTMUST00000067837.1	467	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Vwa5a-004	OTTMUST00000067835.1	356	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 775 bps Translation length: 137 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 08/08/2007)

Alternative symbols

RP23-263O15.1-007

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 38,736,185-38,741,920 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000137972

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Vwa5a-007 OTTMUST00000067838.1

Summary

Transcript-based displays