Transcript: AC090443.3-004 OTTMUST00000070747.1

Description

novel protein similar to EF hand calcium binding domain 1 Efcab1 (1700109H08Rik)

Location

About this transcript

This transcript has 3 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
AC090443.3-001	OTTMUST00000070744.1	773	210aa	OTTMUSP00000036097	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39001	Q9D9C0
AC090443.3-003	OTTMUST00000070746.1	313	70aa	OTTMUSP00000036099	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6YAH5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AC090443.3-002	OTTMUST00000070745.1	817	106aa	OTTMUSP00000036098	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RH70
AC090443.3-004	OTTMUST00000070747.1	235	25aa	OTTMUSP00000036100	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6QJ46	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AC090443.3-005	OTTMUST00000133172.1	2227	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 235 bps Translation length: 25 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 12/09/2007)

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 3,580,498-3,584,344 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000156973

Curation Method

Manual annotation from Havana