Description
Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)
Location
Chromosome 3: 88,336,365-88,343,316 forward strand.
About this transcript
This transcript has 5 exons.
Gene
This transcript is a product of gene OTTMUSG00000052142 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
Smg5-001 | OTTMUST00000131031.1 | 4448 | 1017aa | OTTMUSP00000070126 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38480 | Q6ZPY2 | |
Smg5-008 | OTTMUST00000131035.1 | 1010 | 180aa | OTTMUSP00000070127 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Smg5-004 | OTTMUST00000131038.1 | 833 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Smg5-007 | OTTMUST00000131034.1 | 778 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Smg5-002 | OTTMUST00000131032.1 | 3119 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Smg5-009 | OTTMUST00000131036.1 | 830 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Smg5-005 | OTTMUST00000131037.1 | 769 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Smg5-006 | OTTMUST00000131033.1 | 751 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Smg5-003 | OTTMUST00000131039.1 | 424 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |