Transcript: Sorcs1-005 OTTMUST00000148029.1

Description

sortilin-related VPS10 domain containing receptor 1

Location

About this transcript

This transcript has 19 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sorcs1-001	OTTMUST00000148030.2	7080	1168aa	OTTMUSP00000077002	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GRN1
Sorcs1-002	OTTMUST00000148028.2	4398	1192aa	OTTMUSP00000077000	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GRC4
Sorcs1-004	OTTMUST00000148031.1	3617	1179aa	OTTMUSP00000077003	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GRB7
Sorcs1-003	OTTMUST00000148032.1	3489	1148aa	OTTMUSP00000077004	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GT94
Sorcs1-005	OTTMUST00000148029.1	2645	51aa	OTTMUSP00000077001	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9Q203	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 19 Transcript length: 2,645 bps Translation length: 51 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/11/2015 (Created on 10/11/2015)

Alternative symbols

RP23-213K14.1-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 50,150,967-50,252,678 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000168357

Curation Method

Manual annotation from Havana