Description
PATJ, crumbs cell polarity complex component
Synonyms
Cipp
Location
Chromosome 1: 61,742,477-62,178,675 forward strand.
VEGA68:CM000663.2
About this gene
This gene has 14 transcripts (splice variants), 4 orthologues and 3 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PATJ-001 | OTTHUMT00000023639.3 | 8505 | 1801aa | OTTHUMP00000010233 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS617 | Q8NI35 | |
| PATJ-008 | OTTHUMT00000024680.2 | 2298 | 593aa | OTTHUMP00000010476 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PATJ-014 | OTTHUMT00000488269.2 | 1585 | 452aa | OTTHUMP00000281352 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PATJ-009 | OTTHUMT00000024681.2 | 701 | 146aa | OTTHUMP00000281353 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PATJ-007 | OTTHUMT00000024679.2 | 569 | 139aa | OTTHUMP00000281355 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PATJ-010 | OTTHUMT00000024682.2 | 387 | 111aa | OTTHUMP00000281354 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PATJ-013 | OTTHUMT00000488268.1 | 5242 | 683aa | OTTHUMP00000281351 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PATJ-005 | OTTHUMT00000023643.3 | 4990 | 1134aa | OTTHUMP00000010237 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PATJ-012 | OTTHUMT00000024684.1 | 574 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PATJ-002 | OTTHUMT00000023640.3 | 5448 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PATJ-004 | OTTHUMT00000023642.2 | 5349 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PATJ-003 | OTTHUMT00000023641.3 | 4863 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PATJ-006 | OTTHUMT00000024678.4 | 946 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PATJ-011 | OTTHUMT00000024683.1 | 532 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
