Description
HBS1-like (S. cerevisiae)
Synonyms
KIAA1038, eRF3c, HSPC276, EF-1a, HBS1, ERFS, DKFZp434g247
Location
Chromosome 6: 134,960,378-135,103,056 reverse strand.
VEGA68:CM000668.2
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HBS1L-001 | OTTHUMT00000042339.2 | 7163 | 684aa | OTTHUMP00000017252 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5173 | D9YZV0 | |
| HBS1L-004 | OTTHUMT00000042342.2 | 2793 | 632aa | OTTHUMP00000017255 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47480 | - | |
| HBS1L-006 | OTTHUMT00000391465.1 | 2703 | 642aa | OTTHUMP00000234186 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47479 | - | |
| HBS1L-007 | OTTHUMT00000391464.1 | 2636 | 619aa | OTTHUMP00000234185 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QT46 | |
| HBS1L-010 | OTTHUMT00000391463.1 | 2618 | 520aa | OTTHUMP00000234184 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B7Z524 | |
| HBS1L-009 | OTTHUMT00000391466.1 | 2102 | 554aa | OTTHUMP00000234187 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YDX7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HBS1L-003 | OTTHUMT00000042341.2 | 980 | 215aa | OTTHUMP00000017254 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HBS1L-016 | OTTHUMT00000391546.2 | 881 | 243aa | OTTHUMP00000234221 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PHZ9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HBS1L-014 | OTTHUMT00000391471.1 | 638 | 147aa | OTTHUMP00000234192 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HBS1L-017 | OTTHUMT00000391545.1 | 633 | 170aa | OTTHUMP00000234220 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HBS1L-015 | OTTHUMT00000391468.2 | 629 | 142aa | OTTHUMP00000234189 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HBS1L-012 | OTTHUMT00000391472.1 | 582 | 118aa | OTTHUMP00000234193 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJ90 | |
| HBS1L-013 | OTTHUMT00000391469.2 | 551 | 141aa | OTTHUMP00000234190 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HBS1L-011 | OTTHUMT00000391470.2 | 544 | 167aa | OTTHUMP00000234191 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HBS1L-002 | OTTHUMT00000042340.2 | 2128 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HBS1L-008 | OTTHUMT00000391467.1 | 1600 | 74aa | OTTHUMP00000234188 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HBS1L-005 | OTTHUMT00000042344.2 | 2224 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
