Description
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
Synonyms
FLJ39737, coll-4, CD100
Location
Chromosome 9: 89,360,787-89,498,130 reverse strand.
VEGA68:CM000671.2
About this gene
This gene has 22 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SEMA4D-018 | OTTHUMT00000342411.1 | 5684 | 862aa | OTTHUMP00000208957 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6685 | Q92854 | |
| SEMA4D-004 | OTTHUMT00000342401.2 | 4824 | 862aa | OTTHUMP00000208950 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6685 | Q92854 | |
| SEMA4D-005 | OTTHUMT00000342402.2 | 4382 | 862aa | OTTHUMP00000208951 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS6685 | Q92854 | |
| SEMA4D-006 | OTTHUMT00000342403.3 | 4258 | 738aa | OTTHUMP00000208952 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47991 | - | |
| SEMA4D-001 | OTTHUMT00000402418.2 | 3594 | 738aa | OTTHUMP00000240168 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47991 | - | |
| SEMA4D-008 | OTTHUMT00000143638.1 | 1837 | 123aa | OTTHUMP00000070035 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SEMA4D-013 | OTTHUMT00000342406.4 | 907 | 146aa | OTTHUMP00000208953 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEMA4D-020 | OTTHUMT00000402467.2 | 826 | 66aa | OTTHUMP00000240189 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEMA4D-016 | OTTHUMT00000342409.2 | 602 | 75aa | OTTHUMP00000208956 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEMA4D-014 | OTTHUMT00000342407.2 | 563 | 59aa | OTTHUMP00000208954 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEMA4D-015 | OTTHUMT00000342408.3 | 433 | 1aa | OTTHUMP00000208955 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEMA4D-003 | OTTHUMT00000342331.2 | 2895 | 548aa | OTTHUMP00000208931 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SEMA4D-019 | OTTHUMT00000402464.1 | 2710 | 548aa | OTTHUMP00000240188 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SEMA4D-009 | OTTHUMT00000143639.1 | 3533 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SEMA4D-007 | OTTHUMT00000143640.1 | 3053 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SEMA4D-012 | OTTHUMT00000342405.1 | 493 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SEMA4D-002 | OTTHUMT00000052998.1 | 317 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SEMA4D-010 | OTTHUMT00000143641.1 | 2396 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA4D-011 | OTTHUMT00000342404.2 | 969 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA4D-021 | OTTHUMT00000402466.1 | 599 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA4D-017 | OTTHUMT00000342410.1 | 528 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SEMA4D-022 | OTTHUMT00000402465.1 | 176 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
