Description
Leber congenital amaurosis 5-like
Synonyms
MGC33295
Location
Chromosome 21: 39,405,844-39,445,805 reverse strand.
VEGA68:CM000683.2
About this gene
This gene has 21 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LCA5L-002 | OTTHUMT00000141807.2 | 2564 | 670aa | OTTHUMP00000069085 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13665 | O95447 | |
| LCA5L-001 | OTTHUMT00000141806.3 | 2416 | 670aa | OTTHUMP00000069084 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13665 | O95447 | |
| LCA5L-006 | OTTHUMT00000141811.3 | 2551 | 288aa | OTTHUMP00000273328 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| LCA5L-019 | OTTHUMT00000141835.2 | 885 | 189aa | OTTHUMP00000069091 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LCA5L-009 | OTTHUMT00000141814.3 | 849 | 94aa | OTTHUMP00000109165 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LCA5L-013 | OTTHUMT00000141818.3 | 808 | 93aa | OTTHUMP00000109167 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LCA5L-014 | OTTHUMT00000141819.3 | 804 | 107aa | OTTHUMP00000109168 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LCA5L-010 | OTTHUMT00000141815.3 | 706 | 69aa | OTTHUMP00000109166 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LCA5L-015 | OTTHUMT00000141820.3 | 690 | 63aa | OTTHUMP00000109169 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LCA5L-008 | OTTHUMT00000141813.4 | 657 | 10aa | OTTHUMP00000109164 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LCA5L-017 | OTTHUMT00000141833.3 | 612 | 30aa | OTTHUMP00000109170 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LCA5L-018 | OTTHUMT00000141834.3 | 523 | 95aa | OTTHUMP00000109171 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LCA5L-005 | OTTHUMT00000141810.2 | 3266 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| LCA5L-020 | OTTHUMT00000141836.1 | 972 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LCA5L-007 | OTTHUMT00000141812.1 | 853 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LCA5L-012 | OTTHUMT00000141817.2 | 809 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LCA5L-021 | OTTHUMT00000194971.1 | 775 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LCA5L-016 | OTTHUMT00000141821.1 | 675 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LCA5L-022 | OTTHUMT00000467234.1 | 616 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LCA5L-003 | OTTHUMT00000141808.3 | 1308 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LCA5L-011 | OTTHUMT00000141816.1 | 772 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
