Description
small optic lobes homolog (Drosophila)
Location
Chromosome 16: 527,717-554,636 forward strand.
VEGA68:CM000678.2
About this gene
This gene has 9 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CAPN15-001 | OTTHUMT00000239271.1 | 4744 | 1086aa | OTTHUMP00000147599 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10410 | O75808 | |
| CAPN15-009 | OTTHUMT00000490502.1 | 1482 | 465aa | OTTHUMP00000282725 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN15-005 | OTTHUMT00000420513.2 | 942 | 184aa | OTTHUMP00000249345 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BR03 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN15-006 | OTTHUMT00000420515.3 | 911 | 112aa | OTTHUMP00000249346 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN15-008 | OTTHUMT00000420519.1 | 279 | 71aa | OTTHUMP00000249347 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CAPN15-002 | OTTHUMT00000420516.1 | 2969 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CAPN15-003 | OTTHUMT00000420514.1 | 3174 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CAPN15-007 | OTTHUMT00000420517.1 | 540 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CAPN15-004 | OTTHUMT00000420518.1 | 1952 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
