Description
RUN and FYVE domain containing 1
Synonyms
ZFYVE12, FLJ22251, RABIP4
Location
Chromosome 5: 179,550,558-179,610,026 forward strand.
VEGA68:CM000667.2
About this gene
This gene has 15 transcripts (splice variants), 4 orthologues and 3 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RUFY1-001 | OTTHUMT00000253505.2 | 2646 | 708aa | OTTHUMP00000161521 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4445 | Q96T51 | |
| RUFY1-002 | OTTHUMT00000371901.1 | 2642 | 600aa | OTTHUMP00000223249 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34312 | Q96T51 | |
| RUFY1-005 | OTTHUMT00000371904.2 | 2454 | 600aa | OTTHUMP00000223251 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34312 | Q96T51 | |
| RUFY1-012 | OTTHUMT00000372028.2 | 984 | 328aa | OTTHUMP00000223301 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| RUFY1-009 | OTTHUMT00000372025.2 | 812 | 271aa | OTTHUMP00000223300 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| RUFY1-006 | OTTHUMT00000371908.2 | 658 | 219aa | OTTHUMP00000223253 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| RUFY1-004 | OTTHUMT00000371903.1 | 2560 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RUFY1-003 | OTTHUMT00000371902.1 | 2320 | 324aa | OTTHUMP00000223250 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RUFY1-015 | OTTHUMT00000372032.1 | 1074 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUFY1-011 | OTTHUMT00000372027.2 | 575 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUFY1-007 | OTTHUMT00000371909.1 | 560 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUFY1-010 | OTTHUMT00000372026.1 | 1056 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RUFY1-014 | OTTHUMT00000372030.1 | 854 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RUFY1-008 | OTTHUMT00000372024.1 | 694 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RUFY1-013 | OTTHUMT00000372029.1 | 538 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
