Description
RANBP2-like and GRIP domain containing 5
Synonyms
DKFZp686I1842, RGP5, BS-63
Location
Chromosome 2: 109,792,758-109,857,695 forward strand.
VEGA68:CM000664.2
About this gene
This gene has 13 transcripts (splice variants), 9 orthologues and 5 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RGPD5-001 | OTTHUMT00000253599.3 | 7253 | 1765aa | OTTHUMP00000161611 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2082 | Q99666 | |
| RGPD5-002 | OTTHUMT00000253600.3 | 3304 | 904aa | OTTHUMP00000161612 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2083 | - | |
| RGPD5-010 | OTTHUMT00000330112.3 | 568 | 56aa | OTTHUMP00000203375 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RGPD5-008 | OTTHUMT00000330110.12 | 563 | 134aa | OTTHUMP00000203373 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RGPD5-009 | OTTHUMT00000330111.2 | 541 | 152aa | OTTHUMP00000203374 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RGPD5-005 | OTTHUMT00000330107.1 | 3156 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RGPD5-004 | OTTHUMT00000330106.2 | 2179 | 98aa | OTTHUMP00000203417 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RGPD5-006 | OTTHUMT00000330108.1 | 220 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RGPD5-007 | OTTHUMT00000330109.1 | 6902 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RGPD5-013 | OTTHUMT00000330115.1 | 960 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RGPD5-014 | OTTHUMT00000330116.1 | 646 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RGPD5-012 | OTTHUMT00000330114.1 | 480 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RGPD5-011 | OTTHUMT00000330113.1 | 405 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
