Description
transmembrane channel-like 5
Synonyms
FLJ13593
Location
Chromosome 16: 19,410,496-19,499,113 forward strand.
VEGA68:CM000678.2
About this gene
This gene has 11 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TMC5-006 | OTTHUMT00000435888.1 | 4872 | 1006aa | OTTHUMP00000256167 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45431 | Q6UXY8 | |
| TMC5-001 | OTTHUMT00000254281.2 | 4755 | 948aa | OTTHUMP00000162160 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42126 | - | |
| TMC5-002 | OTTHUMT00000254282.1 | 3687 | 760aa | OTTHUMP00000162161 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10577 | - | |
| TMC5-007 | OTTHUMT00000435887.1 | 3581 | 954aa | OTTHUMP00000256166 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS76837 | F5GYU8 | |
| TMC5-004 | OTTHUMT00000435890.1 | 2487 | 647aa | OTTHUMP00000256169 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| TMC5-005 | OTTHUMT00000435892.1 | 2434 | 689aa | OTTHUMP00000256170 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BN68 | |
| TMC5-013 | OTTHUMT00000467660.1 | 2555 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TMC5-012 | OTTHUMT00000438116.1 | 839 | 32aa | OTTHUMP00000257261 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | I3L0P3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TMC5-011 | OTTHUMT00000438115.1 | 463 | 42aa | OTTHUMP00000257260 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TMC5-009 | OTTHUMT00000435886.1 | 273 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TMC5-008 | OTTHUMT00000435891.1 | 2397 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
